abYsis

Numbering & Regions

Comparison Organism:

Calculating, please wait ...

Region Sequence Details

Regions Definition

Region	Sequence Fragment	Residues	Length
HFR1	EVQLVESGGGLVQAGDSLRLSCAASGGTLN	1 - 30	30
CDR-H1	GYAMA	31 - 35	5
HFR2	WFRQAPGKERDVVA	36 - 49	14
CDR-H2	TINWSGSWKYYADSVKG	50 - 66	17
HFR3	RFTISRDNAKGTVYLQMNSLKPEDTAVYRCAA	67 - 98	32
CDR-H3	RRGGGNYYTRAVDFDY	99 - 114	16
HFR4	WGQGTLVTVSS	115 - 125	11
			125

Region	Definition	Sequence Fragment	Residues	Length
HFR1	Chothia	EVQLVESGGGLVQAGDSLRLSCAAS-----	1 - 25	25
	AbM	EVQLVESGGGLVQAGDSLRLSCAAS-----	1 - 25	25
	Kabat	EVQLVESGGGLVQAGDSLRLSCAASGGTLN	1 - 30	30
	Contact	EVQLVESGGGLVQAGDSLRLSCAASGGTL-	1 - 29	29
	IMGT	EVQLVESGGGLVQAGDSLRLSCAAS-----	1 - 25	25
CDR-H1	Chothia	GGTLNGY---	26 - 32	7
	AbM	GGTLNGYAMA	26 - 35	10
	Kabat	-----GYAMA	31 - 35	5
	Contact	----NGYAMA	30 - 35	6
	IMGT	GGTLNGYA--	26 - 33	8
HFR2	Chothia	AMAWFRQAPGKERDVVATI	33 - 51	19
	AbM	---WFRQAPGKERDVVA--	36 - 49	14
	Kabat	---WFRQAPGKERDVVA--	36 - 49	14
	Contact	---WFRQAPGKERD-----	36 - 46	11
	IMGT	-MAWFRQAPGKERDVVAT-	34 - 50	17
CDR-H2	Chothia	-----NWSGSW---------	52 - 57	6
	AbM	---TINWSGSWKY-------	50 - 59	10
	Kabat	---TINWSGSWKYYADSVKG	50 - 66	17
	Contact	VVATINWSGSWKY-------	47 - 59	13
	IMGT	----INWSGSWK--------	51 - 58	8
HFR3	Chothia	KYYADSVKGRFTISRDNAKGTVYLQMNSLKPEDTAVYRCAA	58 - 98	41
	AbM	--YADSVKGRFTISRDNAKGTVYLQMNSLKPEDTAVYRCAA	60 - 98	39
	Kabat	---------RFTISRDNAKGTVYLQMNSLKPEDTAVYRCAA	67 - 98	32
	Contact	--YADSVKGRFTISRDNAKGTVYLQMNSLKPEDTAVYRC--	60 - 96	37
	IMGT	-YYADSVKGRFTISRDNAKGTVYLQMNSLKPEDTAVYRC--	59 - 96	38
CDR-H3	Chothia	--RRGGGNYYTRAVDFDY	99 - 114	16
	AbM	--RRGGGNYYTRAVDFDY	99 - 114	16
	Kabat	--RRGGGNYYTRAVDFDY	99 - 114	16
	Contact	AARRGGGNYYTRAVDFD-	97 - 113	17
	IMGT	AARRGGGNYYTRAVDFDY	97 - 114	18
HFR4	Chothia	-WGQGTLVTVSS	115 - 125	11
	AbM	-WGQGTLVTVSS	115 - 125	11
	Kabat	-WGQGTLVTVSS	115 - 125	11
	Contact	YWGQGTLVTVSS	114 - 125	12
	IMGT	-WGQGTLVTVSS	115 - 125	11

Accession & Annotations

Accession	ARG41599.1
Source	abYsis-EMBL-IG KY704058 Submitted 19-APR-2017 Updated 19-APR-2017
Name	anti-RON nanobody
Organism	Lama glama
Chain Type	Heavy
Pairing	None
Identical Protein Sequences	None
References	Deschaght P., Vintem A.P., Dombrecht B. 'Large Diversity of Functional Nanobodies from a Camelid Immune Library Revealed by an Alternative Analysis of Next-Generation Sequencing Data' Front Immunol 8:420-420(2017). Deschaght P., Vintem A.P., Dombrecht B. Submitted (06-MAR-2017) to the INSDC. Ablynx NV, Technologiepark 21, Zwijnaarde 9052, Belgium

Tools

Sequences

Amino Acid Sequence:

EVQLVESGGGLVQAGDSLRLSCAASGGTLNGYAMAWFRQAPGKERDVVATINWSGSWKYY
ADSVKGRFTISRDNAKGTVYLQMNSLKPEDTAVYRCAARRGGGNYYTRAVDFDYWGQGTL
VTVSS

DNA Sequence:

gaagtgcagctggtagaaagtggaggaggtttggttcaagccggcgatagtttacgattg
tcatgcgcggcttccggtgggacgttaaacgggtatgctatggcctggtttagacaggct
ccgggcaaggaacgagacgtcgttgcgacgattaactggtccggttcttggaagtactac
gcagattccgttaaaggacgctttaccatctcccgcgataacgcaaaaggaacagtttat
cttcagatgaacagtctgaaaccggaagatacagccgtttatcgttgcgcagctcggcgc
ggggggggcaattattatacgagggctgttgatttcgattattggggccaaggcacgttg
gtaaccgtctcgagt

Data Source:

Alignment settings:

Search settings: