abYsis

Numbering & Regions

Comparison Organism:

Calculating, please wait ...

Region Sequence Details

Regions Definition

Region	Sequence Fragment	Residues	Length
HFR1	QVQLQESGGGLVQPGGSLRLSCAASGFAFS	1 - 30	30
CDR-H1	SYWMY	31 - 35	5
HFR2	WVRQAPEKGLEWVS	36 - 49	14
CDR-H2	TINTGGGITYYKDSVKG	50 - 66	17
HFR3	RFTVSRDNAKNTLYLQMNSLKPEDAAQYYCAT	67 - 98	32
CDR-H3	DMSGTY	99 - 104	6
HFR4	RGQGTQVTVSS	105 - 115	11
Tail	HHHHHH	115 - 121	6
			121

Region	Definition	Sequence Fragment	Residues	Length
HFR1	Chothia	QVQLQESGGGLVQPGGSLRLSCAAS-----	1 - 25	25
	AbM	QVQLQESGGGLVQPGGSLRLSCAAS-----	1 - 25	25
	Kabat	QVQLQESGGGLVQPGGSLRLSCAASGFAFS	1 - 30	30
	Contact	QVQLQESGGGLVQPGGSLRLSCAASGFAF-	1 - 29	29
	IMGT	QVQLQESGGGLVQPGGSLRLSCAAS-----	1 - 25	25
CDR-H1	Chothia	GFAFSSY---	26 - 32	7
	AbM	GFAFSSYWMY	26 - 35	10
	Kabat	-----SYWMY	31 - 35	5
	Contact	----SSYWMY	30 - 35	6
	IMGT	GFAFSSYW--	26 - 33	8
HFR2	Chothia	WMYWVRQAPEKGLEWVSTI	33 - 51	19
	AbM	---WVRQAPEKGLEWVS--	36 - 49	14
	Kabat	---WVRQAPEKGLEWVS--	36 - 49	14
	Contact	---WVRQAPEKGLE-----	36 - 46	11
	IMGT	-MYWVRQAPEKGLEWVST-	34 - 50	17
CDR-H2	Chothia	-----NTGGGI---------	52 - 57	6
	AbM	---TINTGGGITY-------	50 - 59	10
	Kabat	---TINTGGGITYYKDSVKG	50 - 66	17
	Contact	WVSTINTGGGITY-------	47 - 59	13
	IMGT	----INTGGGIT--------	51 - 58	8
HFR3	Chothia	TYYKDSVKGRFTVSRDNAKNTLYLQMNSLKPEDAAQYYCAT	58 - 98	41
	AbM	--YKDSVKGRFTVSRDNAKNTLYLQMNSLKPEDAAQYYCAT	60 - 98	39
	Kabat	---------RFTVSRDNAKNTLYLQMNSLKPEDAAQYYCAT	67 - 98	32
	Contact	--YKDSVKGRFTVSRDNAKNTLYLQMNSLKPEDAAQYYC--	60 - 96	37
	IMGT	-YYKDSVKGRFTVSRDNAKNTLYLQMNSLKPEDAAQYYC--	59 - 96	38
CDR-H3	Chothia	--DMSGTY	99 - 104	6
	AbM	--DMSGTY	99 - 104	6
	Kabat	--DMSGTY	99 - 104	6
	Contact	ATDMSGT-	97 - 103	7
	IMGT	ATDMSGTY	97 - 104	8
HFR4	Chothia	-RGQGTQVTVSS	105 - 115	11
	AbM	-RGQGTQVTVSS	105 - 115	11
	Kabat	-RGQGTQVTVSS	105 - 115	11
	Contact	YRGQGTQVTVSS	104 - 115	12
	IMGT	-RGQGTQVTVSS	105 - 115	11

Accession & Annotations

Accession	6fv0_F
Source	PDB 6fv0 Submitted 28-FEB-2018 Updated 28-MAR-2018
Name	CRYSTAL STRUCTURE OF THE TPR DOMAIN OF KLC1 IN COMPLEX WITH THE C- TERMINAL PEPTIDE OF TORSINA
Organism	Lama glama
Chain Type	Heavy
Pairing	None
Identical Protein Sequences	PDB: 6fuz_N
References	PERNIGO S., STEINER A. 'CRYSTAL STRUCTURE OF THE TPR DOMAIN OF KLC1 IN COMPLEX WITH THE C-TERMINAL PEPTIDE OF TORSINA' TO BE PUBLISHED

Tools

Sequences

Amino Acid Sequence:

QVQLQESGGGLVQPGGSLRLSCAASGFAFSSYWMYWVRQAPEKGLEWVSTINTGGGITYY
KDSVKGRFTVSRDNAKNTLYLQMNSLKPEDAAQYYCATDMSGTYRGQGTQVTVSSHHHHH
H