abYsis

Numbering & Regions

Comparison Organism:

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Region Sequence Details

Regions Definition

Region	Sequence Fragment	Residues	Length
HFR1	QVQLQESGGGLVQAGGSLRLSCAASGRSFN	1 - 30	30
CDR-H1	SYAVG	31 - 35	5
HFR2	WFRQAPGKEREFVA	36 - 49	14
CDR-H2	RISWSGRSTYHADSVKG	50 - 66	17
HFR3	RFTISRDNAKNAVYLQMNSLKPEDTAVYYCAA	67 - 98	32
CDR-H3	DPFPTLSTSPES	99 - 110	12
HFR4	WGQGTQVTVSS	111 - 121	11
			121

Region	Definition	Sequence Fragment	Residues	Length
HFR1	Chothia	QVQLQESGGGLVQAGGSLRLSCAAS-----	1 - 25	25
	AbM	QVQLQESGGGLVQAGGSLRLSCAAS-----	1 - 25	25
	Kabat	QVQLQESGGGLVQAGGSLRLSCAASGRSFN	1 - 30	30
	Contact	QVQLQESGGGLVQAGGSLRLSCAASGRSF-	1 - 29	29
	IMGT	QVQLQESGGGLVQAGGSLRLSCAAS-----	1 - 25	25
CDR-H1	Chothia	GRSFNSY---	26 - 32	7
	AbM	GRSFNSYAVG	26 - 35	10
	Kabat	-----SYAVG	31 - 35	5
	Contact	----NSYAVG	30 - 35	6
	IMGT	GRSFNSYA--	26 - 33	8
HFR2	Chothia	AVGWFRQAPGKEREFVARI	33 - 51	19
	AbM	---WFRQAPGKEREFVA--	36 - 49	14
	Kabat	---WFRQAPGKEREFVA--	36 - 49	14
	Contact	---WFRQAPGKERE-----	36 - 46	11
	IMGT	-VGWFRQAPGKEREFVAR-	34 - 50	17
CDR-H2	Chothia	-----SWSGRS---------	52 - 57	6
	AbM	---RISWSGRSTY-------	50 - 59	10
	Kabat	---RISWSGRSTYHADSVKG	50 - 66	17
	Contact	FVARISWSGRSTY-------	47 - 59	13
	IMGT	----ISWSGRST--------	51 - 58	8
HFR3	Chothia	TYHADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCAA	58 - 98	41
	AbM	--HADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCAA	60 - 98	39
	Kabat	---------RFTISRDNAKNAVYLQMNSLKPEDTAVYYCAA	67 - 98	32
	Contact	--HADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYC--	60 - 96	37
	IMGT	-YHADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYC--	59 - 96	38
CDR-H3	Chothia	--DPFPTLSTSPES	99 - 110	12
	AbM	--DPFPTLSTSPES	99 - 110	12
	Kabat	--DPFPTLSTSPES	99 - 110	12
	Contact	AADPFPTLSTSPE-	97 - 109	13
	IMGT	AADPFPTLSTSPES	97 - 110	14
HFR4	Chothia	-WGQGTQVTVSS	111 - 121	11
	AbM	-WGQGTQVTVSS	111 - 121	11
	Kabat	-WGQGTQVTVSS	111 - 121	11
	Contact	SWGQGTQVTVSS	110 - 121	12
	IMGT	-WGQGTQVTVSS	111 - 121	11

Accession & Annotations

Accession	AXC07730.1
Source	abYsis-EMBL-IG MH492401 Submitted 24-JUL-2018 Updated 24-JUL-2018
Name	N1-1_antiAkt1PH-1AIP24
Organism	Cloning vector pdsg361
Chain Type	Heavy
Pairing	None
Identical Protein Sequences	None
References	Glass D.S., Riedel-Kruse I.H. 'A synthetic bacterial cell-cell adhesion toolbox for programming multicellular morphologies and patterns' Cell 0:0-0(2018). Glass D.S. Submitted (14-JUN-2018) to the INSDC. Bioengineering, Stanford University, 318 Campus Drive, Clark Center E350, Stanford, CA 94305, USA

Tools

Sequences

Amino Acid Sequence:

QVQLQESGGGLVQAGGSLRLSCAASGRSFNSYAVGWFRQAPGKEREFVARISWSGRSTYH
ADSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCAADPFPTLSTSPESWGQGTQVTVS
S

DNA Sequence:

tggtgcaaaacctttgcggtatggcatgatagcgcctactagagaaagaggagaaatact
agatgtccagattagataaaagtaaagtgattaacagcgcattagagctgcttaatgagg
tcggaatcgaaggtttaacaacccgtaaactcgcccagaagctaggtgtagagcagccta
cattgtattggcatgtaaaaaataagcgggctttgctcgacgccttagccattgagatgt
tagataggcaccatactcacttttgccctttagaaggggaaagctggcaagattttttac
gtaataacgctaaaagttttagatgtgctttactaagtcatcgcgatggagcaaaagtac
atttaggtacacggcctacagaaaaacagtatgaaactctcgaaaatcaattagcctttt
tatgccaacaaggtttttcactagagaatgcattatatgcactcagcgctgtggggcatt
ttactttaggttgcgtattggaagatcaagagcatcaagtcgctaaagaagaaagggaaa
cacctactactgatagtatgccgccattattacgacaagctatcgaattatttgatcacc
aaggtgcagagccagccttcttattcggccttgaattgatcatatgcggattagaaaaac
aacttaaatgtgaaagtgggtcctaataatactagagccaggcatcaaataaaacgaaag
gctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctac
tagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagtcccta
tcagtgatagagattgacatccctatcagtgatagagatactgagcactactagagaaag
aggagaaatactagatgattactcatggttgttatacccggacccggcacaagcataagc
taaaaaaaacattgattatgcttagtgctggtttaggattgtttttttatgttaatcaga
actcatttgcaaatggtgaaaattattttaaattgggttcggattcaaaactgttaactc
atgatagctatcagaatcgccttttttatacgttgaaaactggtgaaactgttgccgatc
tttctaaatcgcaagatattaatttatcgacgatttggtcgttgaataagcatttataca
gttctgaaagcgaaatgatgaaggccgcgcctggtcagcagatcattttgccactcaaaa
aacttccctttgaatacagtgcactaccacttttaggttcggcacctcttgttgctgcgg
gtggtgttgctggtcacacgaataaactgactaaaatgtccccggacgtgaccaaaagca
acatgaccgatgacaaggcattaaattatgcggcacaacaggcggcgagtctcggtagcc
agcttcagtcgcgatctctgaacggcgattacgcgaaagataccgctcttggtatcgctg
gtaaccaggcttcgtcacagttgcaggcctggttacaacattatggaacggcagaggtta
atctgcaaagtggtaataactttgacggtagttcactggacttcttattaccgttctatg
attccgaaaaaatgctggcatttggtcaggtcggagcgcgttacattgactcccgcttta
cggcaaatttaggtgcgggtcagcgttttttccttcctgcaaacatgttgggctataacg
tcttcattgatcaggatttttctggtgataatacccgtttaggtattggtggcgaatact
ggcgagactatttcaaaagtagcgttaacggctatttccgcatgagcggctggcatgagt
catacaataagaaagactatgatgagcgcccagcaaatggcttcgatatccgttttaatg
gctatctaccgtcatatccggcattaggcgccaagctgatatatgagcagtattatggtg
ataatgttgctttgtttaattctgataagctgcaatcgaatcctggtgcggcgaccgttg
gtgtaaactatactccgattcctctggtgacgatggggatcgattaccgtcatggtacgg
gtaatgaaaatgatctcctttactcaatgcagttccgttatcagtttgataaatcgtggt
ctcagcaaattgaaccacagtatgttaacgagttaagaacattatcaggcagccgttacg
atctggttcagcgtaataacaatattattctggagtacaagaagcaggatattctttctc
tgaatattccgcatgatattaatggtactgaacacagtacgcagaagattcagttgatcg
ttaagagcaaatacggtctggatcgtatcgtctgggatgatagtgcattacgcagtcagg
gcggtcagattcagcatagcggaagccaaagcgcacaagactaccaggctattttgcctg
cttatgtgcaaggtggcagcaatatttataaagtgacggctcgcgcctatgaccgtaatg
gcaatagctctaacaatgtacagcttactattaccgttctgtcgaatggtcaagttgtcg
accaggttggggtaacggactttacggcggataagacttcggctaaagcggataacgccg
ataccattacttataccgcgacggtgaaaaagaatggggtagctcaggctaatgtccctg
tttcatttaatattgtttcaggaactgcaactcttggggcaaatagtgccaaaacggatg
ctaacggtaaggcaaccgtaacgttgaagtcgagtacgccaggacaggtcgtcgtgtctg
ctaaaaccgcggagatgacttcagcacttaatgccagtgcggttatattttttgatggtg
cgactagacaggtgcaacttcaagaatctggagggggactggtgcaggctggcggtagtt
tgcgcctgtcctgcgcggcgtcgggacgttcgttcaatagctatgcagtaggttggtttc
gccaagctccgggcaaggagcgcgagtttgtcgcgcgcatttcctggtctggtcgctcca
cttaccacgcggattccgtaaaggggcgctttactatttcccgcgacaacgctaagaatg
ccgtatatttgcagatgaacagtctgaagcccgaagatacagcagtatactactgtgccg
ctgatccatttccaacactgtcaacctcgcctgagtcttggggacaaggcacccaagtta
cggttagttcgtaataatactagtagcggccgctgcagtccggcaaaaaagggcaaggtg
tcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggcttcc
tcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactca
aaggcggtaatctcgagtcccgtcaagtcagcgtaatgctctgccagtgttacaaccaat
taaccaattctgattagaaaaactcatcgagcatcaaatgaaactgcaatttattcatat
caggattatcaataccatatttttgaaaaagccgtttctgtaatgaaggagaaaactcac
cgaggcagttccataggatggcaagatcctggtatcggtctgcgattccgactcgtccaa
catcaatacaacctattaatttcccctcgtcaaaaataaggttatcaagtgagaaatcac
catgagtgacgactgaatccggtgagaatggcaaaagcttatgcatttctttccagactt
gttcaacaggccagccattacgctcgtcatcaaaatcactcgcatcaaccaaaccgttat
tcattcgtgattgcgcctgagcgagacgaaatacgcgatcgctgttaaaaggacaattac
aaacaggaatcgaatgcaaccggcgcaggaacactgccagcgcatcaacaatattttcac
ctgaatcaggatattcttctaatacctggaatgctgttttcccggggatcgcagtggtga
gtaaccatgcatcatcaggagtacggataaaatgcttgatggtcggaagaggcataaatt
ccgtcagccagtttagtctgaccatctcatctgtaacatcattggcaacgctacctttgc
catgtttcagaaacaactctggcgcatcgggcttcccatacaatcgatagattgtcgcac
ctgattgcccgacattatcgcgagcccatttatacccatataaatcagcatccatgttgg
aatttaatcgcggcctcgagcaagacgtttcccgttgaatatggctcataacaccccttg
tattactgtttatgtaagcagacagttttattgttcatgatgatatatttttatcttgtg
caatgtaacatcagagattttgagacacaacgtggctttgttgaataaatcgaacttttg
ctgagttgaaggatcagatcacgcatcttcccgacaacgcagaccgttccgtggcaaagc
aaaagttcaaaatcaccaactggtccacctacaacaaagctctcatcaaccgtggctccc
tcactttctggctggatgatggggcgattcaggcctggtatgagtcagcaacaccttctt
cacgaggcagacctcagcgctagcggagtgtatactggcttactatgttggcactgatga
gggtgtcagtgaagtgcttcatgtggcaggagaaaaaaggctgcaccggtgcgtcagcag
aatatgtgatacaggatatattccgcttcctcgctcactgactcgctacgctcggtcgtt
cgactgcggcgagcggaaatggcttacgaacggggcggagatttcctggaagatgccagg
aagatacttaacagggaagtgagagggccgcggcaaagccgtttttccataggctccgcc
cccctgacaagcatcacgaaatctgacgctcaaatcagtggtggcgaaacccgacaggac
tataaagataccaggcgtttcccctggcggctccctcgtgcgctctcctgttcctgcctt
tcggtttaccggtgtcattccgctgttatggccgcgtttgtctcattccacgcctgacac
tcagttccgggtaggcagttcgctccaagctggactgtatgcacgaaccccccgttcagt
ccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggaaagacatgcaa
aagcaccactggcagcagccactggtaattgatttagaggagttagtcttgaagtcatgc
gccggttaaggctaaactgaaaggacaagttttggtgactgcgctcctccaagccagtta
cctcggttcaaagagttggtagctcagagaaccttcgaaaaaccgccctgcaaggcggtt
ttttcgttttcagagcaagagattacgcgcagaccaaaacgatctcaagaagatcatctt
attaaggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgaga
ttatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacct
atctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagata
actacgatacgggagggcttaccatctggccccagtgctgcaatgataccgcgagaccca
cgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcaga
agtggtcctgcaactttatccgcctccatccagtctattccatggtgccacctgacgtct
aagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggcagaatt
tcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttc
tagag

Data Source:

Alignment settings:

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