abYsis

Numbering & Regions

Comparison Organism:

Calculating, please wait ...

Region Sequence Details

Regions Definition

Region	Sequence Fragment	Residues	Length
HFR1	QVQLQESGGGLVQTGGSLRLSCAASGETFS	1 - 30	30
CDR-H1	SYAMG	31 - 35	5
HFR2	WFRQAPGQEREFVS	36 - 49	14
CDR-H2	TISLNSDSAFYADSVKG	50 - 66	17
HFR3	RFTISKGDAKNTVYLQMNDLKPEDTAVYYCAA	67 - 98	32
CDR-H3	GLLGARSNYYSH	99 - 110	12
HFR4	WGQGTQVTVSS	111 - 121	11
			121

Region	Definition	Sequence Fragment	Residues	Length
HFR1	Chothia	QVQLQESGGGLVQTGGSLRLSCAAS-----	1 - 25	25
	AbM	QVQLQESGGGLVQTGGSLRLSCAAS-----	1 - 25	25
	Kabat	QVQLQESGGGLVQTGGSLRLSCAASGETFS	1 - 30	30
	Contact	QVQLQESGGGLVQTGGSLRLSCAASGETF-	1 - 29	29
	IMGT	QVQLQESGGGLVQTGGSLRLSCAAS-----	1 - 25	25
CDR-H1	Chothia	GETFSSY---	26 - 32	7
	AbM	GETFSSYAMG	26 - 35	10
	Kabat	-----SYAMG	31 - 35	5
	Contact	----SSYAMG	30 - 35	6
	IMGT	GETFSSYA--	26 - 33	8
HFR2	Chothia	AMGWFRQAPGQEREFVSTI	33 - 51	19
	AbM	---WFRQAPGQEREFVS--	36 - 49	14
	Kabat	---WFRQAPGQEREFVS--	36 - 49	14
	Contact	---WFRQAPGQERE-----	36 - 46	11
	IMGT	-MGWFRQAPGQEREFVST-	34 - 50	17
CDR-H2	Chothia	-----SLNSDS---------	52 - 57	6
	AbM	---TISLNSDSAF-------	50 - 59	10
	Kabat	---TISLNSDSAFYADSVKG	50 - 66	17
	Contact	FVSTISLNSDSAF-------	47 - 59	13
	IMGT	----ISLNSDSA--------	51 - 58	8
HFR3	Chothia	AFYADSVKGRFTISKGDAKNTVYLQMNDLKPEDTAVYYCAA	58 - 98	41
	AbM	--YADSVKGRFTISKGDAKNTVYLQMNDLKPEDTAVYYCAA	60 - 98	39
	Kabat	---------RFTISKGDAKNTVYLQMNDLKPEDTAVYYCAA	67 - 98	32
	Contact	--YADSVKGRFTISKGDAKNTVYLQMNDLKPEDTAVYYC--	60 - 96	37
	IMGT	-FYADSVKGRFTISKGDAKNTVYLQMNDLKPEDTAVYYC--	59 - 96	38
CDR-H3	Chothia	--GLLGARSNYYSH	99 - 110	12
	AbM	--GLLGARSNYYSH	99 - 110	12
	Kabat	--GLLGARSNYYSH	99 - 110	12
	Contact	AAGLLGARSNYYS-	97 - 109	13
	IMGT	AAGLLGARSNYYSH	97 - 110	14
HFR4	Chothia	-WGQGTQVTVSS	111 - 121	11
	AbM	-WGQGTQVTVSS	111 - 121	11
	Kabat	-WGQGTQVTVSS	111 - 121	11
	Contact	HWGQGTQVTVSS	110 - 121	12
	IMGT	-WGQGTQVTVSS	111 - 121	11

Accession & Annotations

Accession	AXC07842.1
Source	abYsis-EMBL-IG MH492429 Submitted 24-JUL-2018 Updated 24-JUL-2018
Name	N7-13_antiP53NLSRegHis6-R3PNR33
Organism	Cloning vector pdsg392
Chain Type	Heavy
Pairing	None
Identical Protein Sequences	None
References	Glass D.S., Riedel-Kruse I.H. 'A synthetic bacterial cell-cell adhesion toolbox for programming multicellular morphologies and patterns' Cell 0:0-0(2018). Glass D.S. Submitted (14-JUN-2018) to the INSDC. Bioengineering, Stanford University, 318 Campus Drive, Clark Center E350, Stanford, CA 94305, USA

Tools

Sequences

Amino Acid Sequence:

QVQLQESGGGLVQTGGSLRLSCAASGETFSSYAMGWFRQAPGQEREFVSTISLNSDSAFY
ADSVKGRFTISKGDAKNTVYLQMNDLKPEDTAVYYCAAGLLGARSNYYSHWGQGTQVTVS
S

DNA Sequence:

tggtgcaaaacctttgcggtatggcatgatagcgcctactagagaaagaggagaaatact
agatgtccagattagataaaagtaaagtgattaacagcgcattagagctgcttaatgagg
tcggaatcgaaggtttaacaacccgtaaactcgcccagaagctaggtgtagagcagccta
cattgtattggcatgtaaaaaataagcgggctttgctcgacgccttagccattgagatgt
tagataggcaccatactcacttttgccctttagaaggggaaagctggcaagattttttac
gtaataacgctaaaagttttagatgtgctttactaagtcatcgcgatggagcaaaagtac
atttaggtacacggcctacagaaaaacagtatgaaactctcgaaaatcaattagcctttt
tatgccaacaaggtttttcactagagaatgcattatatgcactcagcgctgtggggcatt
ttactttaggttgcgtattggaagatcaagagcatcaagtcgctaaagaagaaagggaaa
cacctactactgatagtatgccgccattattacgacaagctatcgaattatttgatcacc
aaggtgcagagccagccttcttattcggccttgaattgatcatatgcggattagaaaaac
aacttaaatgtgaaagtgggtcctaataatactagagccaggcatcaaataaaacgaaag
gctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctac
tagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagtcccta
tcagtgatagagattgacatccctatcagtgatagagatactgagcactactagagaaag
aggagaaatactagatgattactcatggttgttatacccggacccggcacaagcataagc
taaaaaaaacattgattatgcttagtgctggtttaggattgtttttttatgttaatcaga
actcatttgcaaatggtgaaaattattttaaattgggttcggattcaaaactgttaactc
atgatagctatcagaatcgccttttttatacgttgaaaactggtgaaactgttgccgatc
tttctaaatcgcaagatattaatttatcgacgatttggtcgttgaataagcatttataca
gttctgaaagcgaaatgatgaaggccgcgcctggtcagcagatcattttgccactcaaaa
aacttccctttgaatacagtgcactaccacttttaggttcggcacctcttgttgctgcgg
gtggtgttgctggtcacacgaataaactgactaaaatgtccccggacgtgaccaaaagca
acatgaccgatgacaaggcattaaattatgcggcacaacaggcggcgagtctcggtagcc
agcttcagtcgcgatctctgaacggcgattacgcgaaagataccgctcttggtatcgctg
gtaaccaggcttcgtcacagttgcaggcctggttacaacattatggaacggcagaggtta
atctgcaaagtggtaataactttgacggtagttcactggacttcttattaccgttctatg
attccgaaaaaatgctggcatttggtcaggtcggagcgcgttacattgactcccgcttta
cggcaaatttaggtgcgggtcagcgttttttccttcctgcaaacatgttgggctataacg
tcttcattgatcaggatttttctggtgataatacccgtttaggtattggtggcgaatact
ggcgagactatttcaaaagtagcgttaacggctatttccgcatgagcggctggcatgagt
catacaataagaaagactatgatgagcgcccagcaaatggcttcgatatccgttttaatg
gctatctaccgtcatatccggcattaggcgccaagctgatatatgagcagtattatggtg
ataatgttgctttgtttaattctgataagctgcaatcgaatcctggtgcggcgaccgttg
gtgtaaactatactccgattcctctggtgacgatggggatcgattaccgtcatggtacgg
gtaatgaaaatgatctcctttactcaatgcagttccgttatcagtttgataaatcgtggt
ctcagcaaattgaaccacagtatgttaacgagttaagaacattatcaggcagccgttacg
atctggttcagcgtaataacaatattattctggagtacaagaagcaggatattctttctc
tgaatattccgcatgatattaatggtactgaacacagtacgcagaagattcagttgatcg
ttaagagcaaatacggtctggatcgtatcgtctgggatgatagtgcattacgcagtcagg
gcggtcagattcagcatagcggaagccaaagcgcacaagactaccaggctattttgcctg
cttatgtgcaaggtggcagcaatatttataaagtgacggctcgcgcctatgaccgtaatg
gcaatagctctaacaatgtacagcttactattaccgttctgtcgaatggtcaagttgtcg
accaggttggggtaacggactttacggcggataagacttcggctaaagcggataacgccg
ataccattacttataccgcgacggtgaaaaagaatggggtagctcaggctaatgtccctg
tttcatttaatattgtttcaggaactgcaactcttggggcaaatagtgccaaaacggatg
ctaacggtaaggcaaccgtaacgttgaagtcgagtacgccaggacaggtcgtcgtgtctg
ctaaaaccgcggagatgacttcagcacttaatgccagtgcggttatattttttgatggtg
cgactagacaggtccaattacaagagtcaggaggcgggcttgttcaaactggtgggtcgc
ttcgtctgtcgtgtgccgcttctggtgagacattttcatcatacgcaatgggatggttcc
gtcaggcccctggacaagaacgtgagtttgtatctactatcagcttaaacagcgactcgg
cattctatgcggactcagtaaaagggcgtttcacaatctcgaagggtgatgctaagaata
ccgtgtatctgcaaatgaacgacttaaagcctgaggatactgctgtatattattgtgcgg
ctggacttcttggtgctcgcagtaactactacagtcattggggccaaggaacacaggtca
cagtgagctcataataatactagtagcggccgctgcagtccggcaaaaaagggcaaggtg
tcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggcttcc
tcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactca
aaggcggtaatctcgagtcccgtcaagtcagcgtaatgctctgccagtgttacaaccaat
taaccaattctgattagaaaaactcatcgagcatcaaatgaaactgcaatttattcatat
caggattatcaataccatatttttgaaaaagccgtttctgtaatgaaggagaaaactcac
cgaggcagttccataggatggcaagatcctggtatcggtctgcgattccgactcgtccaa
catcaatacaacctattaatttcccctcgtcaaaaataaggttatcaagtgagaaatcac
catgagtgacgactgaatccggtgagaatggcaaaagcttatgcatttctttccagactt
gttcaacaggccagccattacgctcgtcatcaaaatcactcgcatcaaccaaaccgttat
tcattcgtgattgcgcctgagcgagacgaaatacgcgatcgctgttaaaaggacaattac
aaacaggaatcgaatgcaaccggcgcaggaacactgccagcgcatcaacaatattttcac
ctgaatcaggatattcttctaatacctggaatgctgttttcccggggatcgcagtggtga
gtaaccatgcatcatcaggagtacggataaaatgcttgatggtcggaagaggcataaatt
ccgtcagccagtttagtctgaccatctcatctgtaacatcattggcaacgctacctttgc
catgtttcagaaacaactctggcgcatcgggcttcccatacaatcgatagattgtcgcac
ctgattgcccgacattatcgcgagcccatttatacccatataaatcagcatccatgttgg
aatttaatcgcggcctcgagcaagacgtttcccgttgaatatggctcataacaccccttg
tattactgtttatgtaagcagacagttttattgttcatgatgatatatttttatcttgtg
caatgtaacatcagagattttgagacacaacgtggctttgttgaataaatcgaacttttg
ctgagttgaaggatcagatcacgcatcttcccgacaacgcagaccgttccgtggcaaagc
aaaagttcaaaatcaccaactggtccacctacaacaaagctctcatcaaccgtggctccc
tcactttctggctggatgatggggcgattcaggcctggtatgagtcagcaacaccttctt
cacgaggcagacctcagcgctagcggagtgtatactggcttactatgttggcactgatga
gggtgtcagtgaagtgcttcatgtggcaggagaaaaaaggctgcaccggtgcgtcagcag
aatatgtgatacaggatatattccgcttcctcgctcactgactcgctacgctcggtcgtt
cgactgcggcgagcggaaatggcttacgaacggggcggagatttcctggaagatgccagg
aagatacttaacagggaagtgagagggccgcggcaaagccgtttttccataggctccgcc
cccctgacaagcatcacgaaatctgacgctcaaatcagtggtggcgaaacccgacaggac
tataaagataccaggcgtttcccctggcggctccctcgtgcgctctcctgttcctgcctt
tcggtttaccggtgtcattccgctgttatggccgcgtttgtctcattccacgcctgacac
tcagttccgggtaggcagttcgctccaagctggactgtatgcacgaaccccccgttcagt
ccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggaaagacatgcaa
aagcaccactggcagcagccactggtaattgatttagaggagttagtcttgaagtcatgc
gccggttaaggctaaactgaaaggacaagttttggtgactgcgctcctccaagccagtta
cctcggttcaaagagttggtagctcagagaaccttcgaaaaaccgccctgcaaggcggtt
ttttcgttttcagagcaagagattacgcgcagaccaaaacgatctcaagaagatcatctt
attaaggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgaga
ttatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatc
taaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacct
atctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagata
actacgatacgggagggcttaccatctggccccagtgctgcaatgataccgcgagaccca
cgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcaga
agtggtcctgcaactttatccgcctccatccagtctattccatggtgccacctgacgtct
aagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggcagaatt
tcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttc
tagag

Data Source:

Alignment settings:

Search settings: