abYsis

Numbering & Regions

Comparison Organism:

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Region Sequence Details

Regions Definition

Region	Sequence Fragment	Residues	Length
HFR1	QVKLQESGPAVIKPSQSLSLTCIVSGFSIT	1 - 30	30
CDR-H1	RTNYCWH	31 - 37	7
HFR2	WIRQAPGKGLEWMG	38 - 51	14
CDR-H2	RICYEGSIYYSPSIKS	52 - 67	16
HFR3	RSTISRDTSLNKFFIQLISVTNEDTAMYYCSR	68 - 99	32
CDR-H3	ENHMYETYFDV	100 - 110	11
HFR4	WGQGTTVTVSS	111 - 121	11
Tail	AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD LYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR	121 - 221	100
			221

Accession & Annotations

Accession	1ai1_H
Source	PDB 1ai1 Submitted 06-NOV-1996 Updated 24-FEB-2009
Name	HIV-1 V3 LOOP MIMIC
Organism	Mus musculus
Chain Type	Heavy
Pairing	1ai1_L
Identical Protein Sequences	PDB: 1acy_H
References	GHIARA B., FERGUSON C., SATTERTHWAIT C., DYSON J., WILSON A. 'STRUCTURE-BASED DESIGN OF A CONSTRAINED PEPTIDE MIMIC OF THE HIV-1 V3 LOOP NEUTRALIZATION SITE.' J.MOL.BIOL. V. 266 31 1997 ISSN 0022-2836

Tools

Sequences

Amino Acid Sequence:

QVKLQESGPAVIKPSQSLSLTCIVSGFSITRTNYCWHWIRQAPGKGLEWMGRICYEGSIY
YSPSIKSRSTISRDTSLNKFFIQLISVTNEDTAMYYCSRENHMYETYFDVWGQGTTVTVS
SAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQS
DLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR

Data Source:

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